| 研究成果 |
1. Fang C, Ma Y, Yuan L, Wang Z, Yang R, Zhou Z, Liu T, and Tian Z†. 2016. Chloroplasts DNA underwent independent selection from nuclear genes during soybean domestication and improvement. J Genet Genomics (in press)
2. Liu T, Fang C, Ma Y, Shen Y, Li C, Li Q, Wang M, Liu S, Zhang J, Zhou Z, Yang R, Wang Z, and Tian Z†. 2016. Global investigation of the coevolution of MIRNA genes and microRNA targets during soybean domestication. Plant J (in press)
4. Zhou Z*, Jiang Y*, Wang Z*, Gou Z*, Lyu J*, Li W*, Yu Y, Shu L, ZhaoY, Ma Y, Fang C, Shen Y, Liu T, Li C, Li Q, Wu M, Wang M, Wu Y, Dong Y, Wan W, Wang X, Ding Z, Gao Y, Xiang H, Zhu B, Lee SH, Wang W†, and Tian Z†. 2015. Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean. Nat Biotechnol 33: 408-414
5. Wang Z*, Zhou Z*, Liu Y*, Liu T, Li Q, Ji Y, Li C, Fang C, Wang M, Wu M, Shen Y, Tang T†, Ma J†, and Tian Z†. 2015. Functional evolution of phosphatidylethanolamine-binding proteins in soybean and Arabidopsis. Plant Cell 27: 323-336
6. Yang K*, Tian Z*, Chen C*, Luo L*, Zhao B, Wang Z, Yu L, Li Y, Sun Y, Li W, Chen Y, Li Y, Zhang Y, Ai D, Zhao J, Shang C, Ma Y, Wu B, Wang M, Gao L, Sun D, Zhang P, Guo F, Wang W, Li Y, Wang J, Varshney RK†, Wang J†, Ling HQ†,and Wan P†. 2015. Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proc Natl Acad Sci USA. 112: 13213-13218
7. Bai C*, Guo P*, Zhao Q, Lv Z, Zhang S, Gao F, Gao L, Wang Y, Tian Z, Wang J, Yang F, and Liu C†. 2015. Protomer roles in chloroplast chaperonin assembly and function. Mol Plant 8: 1478-1492
8. Shen Y*, Zhou Z*, Wang Z, Li W, Fang C, Wu M, Ma Y, Liu T, Kong LA, Peng DL, and Tian Z†. 2014. Global dissection of alternative splicing in paleopolyploid soybean. Plant Cell 26: 996–1008
9. Fang C*, Li C*, Li W, Wang Z, Zhou Z, Shen Y, Wu M, Wu Y, Li G, Kong LA, Liu C, Jackson SA†, and Tian Z†. 2014. Concerted evolution of D1 and D2 to regulate chlorophyll degradation in soybean. Plant J 77, 700–712
10. Zhang F*, ShenY*, Sun S*, Guo J*, Li C, Wu C, Li Q, Nian H, Huang X†, Tian Z†, and Han T†. 2014. Genome-wide gene expression analysis in a dwarf soybean mutant. Plant Genet Resour 12: S70-S73
11. Ping J*, Liu Y*, Sun L*, Zhao M, Li Y, She M, Sui Y, Lin F, Liu X, Tang Z, Nguyen H, Tian Z, Qiu L, Nelson RL, Clemente TE, Specht JE, and Ma J†. 2014. Dt2 is a gain-of-function MADS-domain factor gene that specifies semideterminacy in soybean. Plant Cell 26:2831-2842
12. Zhou Z*, Wang Z*, Li W*, Fang C, Shen Y, Li C, Wu Y, and Tian Z†. 2013. Comprehensive analyses of microRNA genes evolution in paleopolyploid soybean genome. Plant J 76: 332-344
13. Fang C, Li W, Li G, Wang Z, Zhou Z, Ma Y, Shen Y, Li C, Wu Y, Zhu B, Yang W, and Tian Z†. 2013. Cloning of Ln gene through combined approach of map-based cloning and association study in soybean. J Genet Genomics 40: 93-96
14. Tian Z, Zhao M, She M, Du J, Cannon S, Liu X, Xu X, Qi X, Li M, Lam H, and Ma J†. 2012. Genome-wide characterization of non-reference transposons reveals evolutionary propensities of transposons in soybean. Plant Cell 24: 4422-4436
15. Du J, Tian Z, Sui Y, Zhao M, Song Q, Cannon SB, Cregan P, and Ma J†. 2012. Pericentromeric effects shape the patterns of divergence, retention, and expression of duplicated genes in the Paleopolyploid Soybean. Plant Cell 24:21-32
16. Tian Z, Yu Y, Lin F, Yu YS, SanMiguel JP, Wing AR, McCouch RS, Ma J†, and Jackson AS†. 2011. Exceptional lability of a genomic complex in rice and its close relatives. BMC Genomics.12:124
17. Yan C*, Tian Z*, Fang Y, Yang Y, Li J, Zeng S, Gu S, Xu C, Tang S, and Gu M†. 2011. Genetic dissection of starch paste viscosity characteristics in glutinous rice (Oryza sativa L.). Theor Appl Genet 122: 63-76
18. Gao Z, Zeng D, Cheng F, Tian Z, Guo L, Su Y, Yan M, Jiang H, Dong G, Huang Y, Han H, Li J, and Qian Q†. 2011. ALK, the key gene for gelatinization temperature, is a modifier gene for gel consistency in rice (Oryza sativa L.). J Integr Plant Biol.10:756
19. Tian Z*, Wang X*, Lee R, Li Y, Specht J, Nelson R, McClean P†, Qiu L†, and Ma J†. 2010. Artificial selection for determinate growth habit in soybean. Proc Natl Acad Sci USA 107: 8563-8568
20. Tian Z*, Yan C*, Qian Q, Yan S, Xie H, Wang F, Xu J, Liu G, Wang Y, Liu Q, Tang S, Li J†, Gu M†. 2010. Development of gene-tagged molecular markers for starch synthesis-related genes in rice. Chinese Sci Bull 55: 2591-2601
21. Du J, Tian Z, Schmutz J, Bowen NJ, Shoemaker RC, and Ma J†. 2010. Bifurcation and enhancement of autonomous-nonautonomous retrotransposon partnership through LTR swapping in soybean. Plant Cell 22: 48-61
22. Du J, Tian Z, Hans C, Laten H, Jackson S, Cannon S, Shoemaker R†, and Ma J†. 2010. Evolutionary conservation, diversity and specificity of LTR-retrotransposons in flowering plants: insights from genome-wide analysis and multi-specific comparison. Plant J 63: 584-598
23. Du J, Grant D, Tian Z, Nelson RT, Zhu L, Shoemaker RC, and Ma J. 2010. SoyTEdb: a comprehensive database of transposable elements in the soybean genome. BMC Genomics 11: 113
24. Schmutz J, Cannon SB, Schlueter J, Ma J, ... Du J, Tian Z, Zhu L.…, Rokhsar D, Shoemaker RC, and Jackson SA†. 2010. Genome sequence of the paleopolyploid soybean. Nature 463: 178-183
25. Tian Z*, Qian Q*, Liu Q*, Yan M, Liu X, Yan C, Liu G, Gao Z, Tang S, Zeng D, Wang Y, Yu J†, Gu M†, and Li J†. 2009. Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities. Proc Natl Acad Sci USA 106: 21760-21765.
26. Tian Z*, Rizzon C*, Du J, Zhu L, Bennetzen J L, Jackson SA†, Gaut B†, and Ma J†. 2009. Do genetic recombination and gene density shape the pattern of DNA elimination in rice LTR-retrotransposons? Genome Res 19:2221-2230.
27. Wu J*, Fujisawa M*, Tian Z*, Yamagata H, Kamiya K, Shibata M, Hosokawa S, Ito Y, Hamada M, Katagiri S, Kurita K, Yamamoto M, Kikuta A, Machita K, Karasawa W, Kanamori H, Namiki N, Mizuno H, Ma J, Sasaki T, and Matsumoto T†. 2009. Comparative analysis of complete orthologous centromeres from two subspecies of rice reveals rapid variation of centromere organization and structure. Plant J 60:805-819
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